Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Anaplastic_large_cell_lymphoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
166 179

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,02:01 37:01,39:01 06:02,12:03 01:01,01:01 None 05:01,05:01 16:01,01:01
RPKM HLA_B rpkm 132.4 ; HLA_C rpkm 211.58 ; HLA_DQA1 rpkm 17.4 ; HLA_A rpkm 273.89 ; HLA_DQB1 rpkm 19.25 ; HLA_DRB1 rpkm 80.58
Note In HLA_B 39:01 , HLA_DQA1 01:01 , HLA_A 02:01 , HLA_DQB1 05:01 , HLA_DRB1 16:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Anaplastic_large_cell_lymphoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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