Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Skin, Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Anaplastic_large_cell_lymphoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
554 1241

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:02,02:01 55:01,55:01 03:03,06:02 03:02,01:02 None None 13:07,04:03
RPKM HLA_B rpkm 62.87 ; HLA_A rpkm 106.13 ; HLA_DRB1 rpkm 0.11 ; HLA_DQA1 rpkm 0.12 ; HLA_C rpkm 148.24
Note In HLA_DRB1 04:03 , HLA_DQA1 03:02 and 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Skin, Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Anaplastic_large_cell_lymphoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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