Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
241 540

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,03:01 15:01,15:01 03:04,03:04 01:02,01:02 None 06:02,06:02 15:01,13:07
RPKM HLA_C rpkm 13.74 ; HLA_A rpkm 40.3 ; HLA_DRB1 rpkm 53.16 ; HLA_DQB1 rpkm 56.51 ; HLA_B rpkm 21.46 ; HLA_DQA1 rpkm 63.85
Note In HLA_C 03:04 , HLA_B 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background