Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
356 810

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,03:01 07:02,52:01 12:02,07:02 01:02,01:02 None 06:02,06:02 15:01,13:07
RPKM HLA_A rpkm 39.34 ; HLA_B rpkm 28.09 ; HLA_C rpkm 27.68 ; HLA_DQA1 rpkm 66.55 ; HLA_DQB1 rpkm 40.19 ; HLA_DRB1 rpkm 60.94
Note In HLA_C 12:02 , HLA_DRB1 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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