Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ns, Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Ns, Lymphoid_neoplasm Histology Subtype Ns, Diffuse_large_b_cell_lymphoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
412 1012

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 44:02,44:02 05:01,05:01 05:01,05:01 None 03:01,03:01 12:01,03:17
RPKM HLA_DQB1 rpkm 64.59 ; HLA_B rpkm 483.51 ; HLA_A rpkm 470.08 ; HLA_DQA1 rpkm 4.2 ; HLA_C rpkm 218.79 ; HLA_DRB1 rpkm 116.55
Note In HLA_DRB1 03:17. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ns, Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Ns, Lymphoid_neoplasm Histology Subtype Ns, Diffuse_large_b_cell_lymphoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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