Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity None Tumour Source Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
174 403

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
32:01,29:02 44:02,44:02 05:01,16:01 02:01,02:01 None 02:01,03:03 07:01,14:103
RPKM HLA_DQA1 rpkm 5.36 ; HLA_C rpkm 406.52 ; HLA_A rpkm 525.06 ; HLA_B rpkm 821.86 ; HLA_DQB1 rpkm 4.72 ; HLA_DRB1 rpkm 28.23
Note In HLA_A 32:01 , HLA_DQB1 02:01 and 03:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity None Tumour Source Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background