Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Ductal_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Liver

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
407 901

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:06,24:02 07:02,59:01 07:02,01:02 02:01,02:01 None 06:13,06:13 11:04,15:01
RPKM HLA_A rpkm 90.28 ; HLA_DQB1 rpkm 0.13 ; HLA_DQA1 rpkm 0.07 ; HLA_C rpkm 33.71 ; HLA_DRB1 rpkm 0.26 ; HLA_B rpkm 7.4
Note In HLA_A 02:06 , HLA_DQB1 06:13 , HLA_DRB1 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Ductal_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Liver
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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