Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Peripheral_t_cell_lymphoma_unspecified
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
84 102

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:01,01:01 14:02,08:01 07:01,08:01 04:01,04:01 None 03:04,02:02 15:01,11:01
RPKM HLA_C rpkm 11.92 ; HLA_DRB1 rpkm 0.23 ; HLA_B rpkm 3.1 ; HLA_A rpkm 8.1 ; HLA_DQA1 rpkm 0.03 ; HLA_DQB1 rpkm 0.45
Note In HLA_C 07:01 and 08:01 , HLA_DRB1 15:01 and 11:01 , HLA_B 14:02 , HLA_A 33:01 , HLA_DQB1 03:04 and 02:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Peripheral_t_cell_lymphoma_unspecified
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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