Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Female Age None
Ethnicity Caucasian Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
261 621

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,24:02 44:02,44:02 05:01,05:01 None None 03:02,03:02 11:04,12:01
RPKM HLA_C rpkm 114.15 ; HLA_B rpkm 134.13 ; HLA_A rpkm 160.29 ; HLA_DRB1 rpkm 0.05 ; HLA_DQB1 rpkm 0.05
Note In HLA_A 02:01 , HLA_DRB1 11:04 and 12:01 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Female Age None
Ethnicity Caucasian Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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