Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Colon, Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Nan, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
380 430

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:01 07:02,15:18 07:04,07:04 03:02,03:02 None 06:11,05:01 13:27,15:01
RPKM HLA_DRB1 rpkm 0.1 ; HLA_B rpkm 44.74 ; HLA_DQB1 rpkm 2.0 ; HLA_C rpkm 85.26 ; HLA_DQA1 rpkm 0.03 ; HLA_A rpkm 127.54
Note In HLA_DRB1 15:01 , HLA_B 15:18 , HLA_DQB1 06:11 , HLA_C 07:04 , HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Colon, Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Nan, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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