Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Soft_tissue Site Subtype Fibrous_tissue_and_uncertain_origin
Primary Histology Synovial_sarcoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
434 959

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 49:01,07:02 07:01,07:01 None None None None
RPKM HLA_A rpkm 539.56 ; HLA_B rpkm 203.92 ; HLA_C rpkm 273.08
Note In HLA_C 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Soft_tissue Site Subtype Fibrous_tissue_and_uncertain_origin
Primary Histology Synovial_sarcoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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