Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_leukaemic_transformation_of_essential_thrombocythaemia
Gender Female Age None
Ethnicity None Tumour Source Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
269 593

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,02:01 44:03,40:02 14:03,03:03 03:02,01:02 None 06:04,06:04 13:02,04:06
RPKM HLA_A rpkm 169.87 ; HLA_B rpkm 251.37 ; HLA_C rpkm 138.89 ; HLA_DQA1 rpkm 3.48 ; HLA_DQB1 rpkm 1.83 ; HLA_DRB1 rpkm 17.1
Note In HLA_B 44:03 , HLA_C 14:03 , HLA_DQA1 03:02 and 01:02 , HLA_DQB1 06:04 , HLA_DRB1 13:02 and 04:06. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_leukaemic_transformation_of_essential_thrombocythaemia
Gender Female Age None
Ethnicity None Tumour Source Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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