Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Cervix Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Squamous_cell_carcinoma
Gender Female Age None
Ethnicity Mongoloid Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
323 719

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 40:02,40:02 03:04,03:04 None None 06:01,06:01 15:02,15:02
RPKM HLA_A rpkm 289.25 ; HLA_B rpkm 84.49 ; HLA_C rpkm 92.8 ; HLA_DQB1 rpkm 0.05 ; HLA_DRB1 rpkm 0.07
Note In HLA_C 03:04 , HLA_DRB1 15:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Cervix Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Squamous_cell_carcinoma
Gender Female Age None
Ethnicity Mongoloid Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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