Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
238 275

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,11:01 46:01,40:01 01:03,03:10 01:03,05:02 None 06:01,03:04 11:01,08:03
RPKM HLA_B rpkm 204.35 ; HLA_A rpkm 343.85 ; HLA_DQB1 rpkm 2.83 ; HLA_DRB1 rpkm 82.04 ; HLA_DQA1 rpkm 1.33 ; HLA_C rpkm 167.03
Note In HLA_DQB1 03:04 , HLA_DRB1 08:03 , HLA_DQA1 01:03 and 05:02 , HLA_C 01:03 and 03:10. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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