Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line, Ns HLA Types Not Available
Primary Site Large_intestine Site Subtype Colon, Ns
Primary Histology Carcinoma Histology Subtype Ns, Adenocarcinoma
Gender Male, Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lung, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
332 779

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:01 35:01,18:01 04:01,07:01 None None 06:07,06:07 13:09,03:17
RPKM HLA_DQB1 rpkm 0.02 ; HLA_C rpkm 210.95 ; HLA_DRB1 rpkm 0.02 ; HLA_A rpkm 349.65 ; HLA_B rpkm 146.6
Note In HLA_DQB1 06:07 , HLA_C 07:01 , HLA_DRB1 03:17. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line, Ns HLA Types Not Available
Primary Site Large_intestine Site Subtype Colon, Ns
Primary Histology Carcinoma Histology Subtype Ns, Adenocarcinoma
Gender Male, Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lung, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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