Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Soft_tissue Site Subtype Striated_muscle
Primary Histology Rhabdomyosarcoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
54 63

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:03,24:03 07:02,51:09 07:02,01:02 02:01,02:01 None None 15:01,11:14
RPKM HLA_B rpkm 7.57 ; HLA_A rpkm 117.98 ; HLA_DQA1 rpkm 0.03 ; HLA_C rpkm 53.33 ; HLA_DRB1 rpkm 0.08
Note In HLA_B 51:09 , HLA_A 24:03 , HLA_DRB1 15:01 and 11:14. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Soft_tissue Site Subtype Striated_muscle
Primary Histology Rhabdomyosarcoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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