Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Oesophagus Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Squamous_cell_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
590 1430

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 15:07,40:06 15:02,03:03 03:02,03:02 None 04:01,04:01 04:03,01:01
RPKM HLA_DQA1 rpkm 0.18 ; HLA_A rpkm 104.65 ; HLA_C rpkm 65.16 ; HLA_B rpkm 124.93 ; HLA_DRB1 rpkm 0.98 ; HLA_DQB1 rpkm 0.06
Note In HLA_DQA1 03:02 , HLA_C 15:02 , HLA_B 15:07 , HLA_DRB1 04:03 and 01:01 , HLA_DQB1 04:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Oesophagus Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Squamous_cell_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background