Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Kidney Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Renal_cell_carcinoma
Gender Unknown Age None
Ethnicity None Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
302 671

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:01,33:01 14:02,14:02 08:02,08:02 None None 05:01,05:01 01:02,01:02
RPKM HLA_A rpkm 76.14 ; HLA_B rpkm 80.39 ; HLA_C rpkm 36.53 ; HLA_DQB1 rpkm 4.72 ; HLA_DRB1 rpkm 0.26
Note In HLA_A 33:01 , HLA_C 08:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Kidney Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Renal_cell_carcinoma
Gender Unknown Age None
Ethnicity None Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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