Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Lymph_node
Primary Histology Lymphoid_neoplasm Histology Subtype Hodgkin_lymphoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Skin

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
36 39

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,32:01 08:01,44:02 05:01,07:01 None None None 13:12,01:01
RPKM HLA_DRB1 rpkm 0.26 ; HLA_A rpkm 87.34 ; HLA_C rpkm 39.52 ; HLA_B rpkm 39.9
Note In HLA_DRB1 01:01 , HLA_A 32:01 , HLA_C 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Lymph_node
Primary Histology Lymphoid_neoplasm Histology Subtype Hodgkin_lymphoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Skin
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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