Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Ns
Gender Male Age None
Ethnicity Caucasian Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
189 403

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,29:02 44:03,39:06 16:01,07:02 03:02,03:02 None 04:01,04:01 08:01,11:19
RPKM HLA_B rpkm 15.7 ; HLA_A rpkm 60.34 ; HLA_DRB1 rpkm 0.55 ; HLA_DQA1 rpkm 0.02 ; HLA_C rpkm 46.9 ; HLA_DQB1 rpkm 0.02
Note In HLA_B 44:03 and 39:06 , HLA_DRB1 08:01 and 11:19 , HLA_DQA1 03:02 , HLA_DQB1 04:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Ns
Gender Male Age None
Ethnicity Caucasian Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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