Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoid-Endocrine_tumour Histology Subtype Ns
Gender Unknown Age None
Ethnicity None Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
333 781

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:02,29:02 35:08,51:09 04:01,16:01 None None None None
RPKM HLA_A rpkm 71.27 ; HLA_B rpkm 0.78 ; HLA_C rpkm 5.28
Note In HLA_A 03:02 , HLA_B 35:08 and 51:09 , HLA_C 04:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoid-Endocrine_tumour Histology Subtype Ns
Gender Unknown Age None
Ethnicity None Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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