Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
233 553

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
29:02,02:01 27:07,44:03 15:02,15:02 05:01,04:01 None 04:02,03:09 13:55,11:01
RPKM HLA_C rpkm 10.26 ; HLA_DRB1 rpkm 110.36 ; HLA_B rpkm 9.88 ; HLA_DQA1 rpkm 54.72 ; HLA_DQB1 rpkm 26.06 ; HLA_A rpkm 23.31
Note In HLA_DRB1 11:01 , HLA_DQA1 05:01 , HLA_DQB1 04:02 and 03:09. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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