Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Lymph_node
Primary Histology Lymphoid_neoplasm Histology Subtype Follicular_lymphoma
Gender Female Age None
Ethnicity None Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
794 1780

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 44:02,44:02 07:04,05:01 01:02,01:02 None 05:02,05:02 01:01,16:01
RPKM HLA_A rpkm 91.16 ; HLA_B rpkm 49.47 ; HLA_C rpkm 35.36 ; HLA_DQA1 rpkm 43.12 ; HLA_DQB1 rpkm 19.97 ; HLA_DRB1 rpkm 35.46
Note In HLA_C 07:04 , HLA_DQA1 01:02 , HLA_DRB1 16:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Lymph_node
Primary Histology Lymphoid_neoplasm Histology Subtype Follicular_lymphoma
Gender Female Age None
Ethnicity None Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background