Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Liver Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Hepatocellular_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
431 1050

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:06,11:01 35:08,08:20 07:02,01:03 None None None 13:03,04:05
RPKM HLA_A rpkm 73.26 ; HLA_C rpkm 73.52 ; HLA_B rpkm 2.51 ; HLA_DRB1 rpkm 0.09
Note In HLA_A 02:06 , HLA_C 01:03 , HLA_B 35:08 , HLA_DRB1 13:03 and 04:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Liver Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Hepatocellular_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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